ISSN: 0973-7510

E-ISSN: 2581-690X

Li Qiu-fen1 , Jiang Wei-wei1,2, Liu Huai-de1 and Li Xiao-long1
1Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao – 266 071, China.
2College of Marine Life sciences, Ocean University of China, Qingdao – 266 100, China.
J Pure Appl Microbiol. 2013;7(2):1285-1293
© The Author(s). 2013
Received: 20/04/2013 | Accepted: 31/05/2013 | Published: 30/06/2013
Abstract

A rapid real-time quantitative PCR method was developed for
V. parahaemolyticus
in sediment of the Stichopus japonicus culture pond by using specific primers targeted toxR gene. The known number V. parahaemolyticus cells were spiked into sterile sediment served as the simulative sediment samples. Three modified sediment DNA extraction methods were tried, it was proved that modified lysozyme-SDS gentle lyse method is feasible for the sediment DNA extraction. The standard curves was made by using serial diluted total DNA extracted from the simulated sediment and which from plasmid of pure culture. Besides, sensitivity, specificity and repeatability of the detection method were demonstrated well. The quantification limit was found to be 102 cfu g-1 for V. parahaemolyticus in sediment, and have a high repeatability as a result of all the coefficient of variation (CV) values between 0.31% and 0.92%, less than 5%. Development of the real-time PCR quantification method for V. parahaemolyticus in the sediment was important for disease prevention the cultured Stichopus japonicas.

Keywords

toxR, Vibrio parahaemolyticus, Real-time Quantitative PCR, Stichopus japonicus culture pond, Sediment DNA extraction method

Article Metrics

Article View: 831

Share This Article

© The Author(s) 2014. Open Access. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License which permits unrestricted use, sharing, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.