ISSN: 0973-7510

E-ISSN: 2581-690X

Review Article | Open Access
Bindiya Ghedia1 , Gautamkumar Dhokia2, Prashant Dave3 and Parit Rana1
1Department of Microbiology, Smt. B.K. Shah Medical Institute and Research Centre, Pipariya, Vadodara, Gujarat, India.
2Department of Forensic Medicine and Toxicology, Parul Institute of Medical Science and Research, Limda, Vadodara, Gujarat, India.
3Department of Community Medicine, Parul Institute of Medical Science and Research, Limda, Vadodara, Gujarat, India.
Article Number: 11022 | © The Author(s). 2026
J Pure Appl Microbiol. 2026;20(1):131-138. https://doi.org/10.22207/JPAM.20.1.54
Received: 04 October 2025 | Accepted: 22 January 2026 | Published online: 09 March 2026
Issue online: March 2026
Abstract

Conventional microbial diagnostic techniques encounter considerable obstacles, such as prolonged turnaround times, labor-intensive protocols, and constraints in precision. To fix these problems and improve diagnostic capabilities, clinical microbiology is using more and more artificial intelligence (AI) technologies. To systematically evaluate the present applications, developments, and influence of artificial intelligence technologies in clinical and diagnostic microbiology, emphasizing pathogen identification, antimicrobial resistance detection, and laboratory automation. A thorough systematic literature search was performed utilizing the PubMed, Scopus, Web of Science, and Google Scholar databases from 2020-2024. Search terms comprised combinations of “artificial intelligence”, “machine learning”, “clinical microbiology”, “diagnostic microbiology”, “pathogen identification”, and “antimicrobial resistance”. Studies detailing AI applications in clinical microbiology were included, whereas non-English articles and review papers were excluded. Eighty-nine studies met the requirements for inclusion. Machine learning algorithms showed high accuracy (85%-99%) in finding pathogens in different types of samples. Deep learning models outperformed others in predicting antimicrobial resistance, with AUROC (Area Under the Receiver Operating Characteristic) values above 0.83. AI-enhanced microscopy and automated image analysis cut down on the time it took to make a diagnosis from days to hours while keeping the sensitivity (92%-98%) and specificity (81%-95%) high. AI technologies have transformed clinical microbiology by delivering swift and precise diagnostic solutions. Combining machine learning with MALDI-TOF MS (Matrix-Assisted Laser Desorption/Ionization Time-of-Flight), automated microscopy, and genomic analysis has made it easier to find pathogens and test for antibiotic resistance. AI is a game-changing force in modern diagnostic microbiology, even though it is hard to standardize and use.

Keywords

Artificial Intelligence, Machine Learning, Clinical Microbiology, Pathogen Identification, Antimicrobial Resistance, MALDI-TOF, Diagnostic Automation

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© The Author(s) 2026. Open Access. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License which permits unrestricted use, sharing, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.